STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1443COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: ava:Ava_2725 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold. (318 aa)    
Predicted Functional Partners:
Chro_1442
PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: npu:Npun_F0093 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase.
 
   0.898
Chro_1527
Hypothetical protein; PFAM: Domain of unknown function (DUF3598); KEGG: ana:all1756 hypothetical protein; SPTR: All1756 protein.
  
     0.749
Chro_1644
Tocopherol cyclase; KEGG: ana:all0245 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.730
Chro_0306
Homogentisate phytyltransferase; PFAM: UbiA prenyltransferase family; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537; KEGG: npu:Npun_R1870 tocopherol phytyltransferase; PFAM: UbiA prenyltransferase; SPTR: UbiA prenyltransferase.
  
    0.725
Chro_2314
PFAM: Complex I intermediate-associated protein 30 (CIA30); NAD dependent epimerase/dehydratase family; InterPro IPR001509:IPR013857; KEGG: npu:Npun_F6553 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; NAD-dependent epimerase/dehydratase; SPTR: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30.
  
    0.683
Chro_2424
TspO and MBR related proteins; PFAM: TspO/MBR family; COGs: COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog); InterPro IPR004307; KEGG: npu:Npun_F0486 TspO and MBR like protein; PFAM: TspO/MBR family protein; SPTR: TspO and MBR like protein.
  
    0.657
Chro_1245
PFAM: Saccharopine dehydrogenase; COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: npu:Npun_R2958 saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase; SPTR: Saccharopine dehydrogenase.
  
     0.654
Chro_0022
KEGG: ava:Ava_0202 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.622
Chro_0414
KEGG: npu:Npun_R1321 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.620
Chro_0604
Protein of unknown function DUF2301, transmembrane; PFAM: Uncharacterized integral membrane protein (DUF2301); COGs: COG5413 Uncharacterized integral membrane protein; InterPro IPR019275; KEGG: ava:Ava_3793 hypothetical protein; PFAM: Protein of unknown function DUF2301, transmembrane; SPTR: Putative uncharacterized protein.
  
     0.619
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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