STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1452Prevent-host-death family protein; PFAM: Protein of unknown function (DUF2281); TIGRFAM: prevent-host-death family protein; InterPro IPR006442; KEGG: npu:Npun_F4199 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prevent-host-death family protein. (75 aa)    
Predicted Functional Partners:
Chro_1453
COGs: COG3744 conserved hypothetical protein; KEGG: cyc:PCC7424_4531 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.850
Chro_1349
PilT protein domain protein; PFAM: PIN domain; COGs: COG3744 conserved hypothetical protein; InterPro IPR002716; KEGG: ana:all4135 hypothetical protein; PFAM: PilT protein domain protein; SPTR: All4135 protein.
 
    0.779
Chro_0429
PilT protein domain protein; PFAM: PIN domain; COGs: COG3744 conserved hypothetical protein; InterPro IPR002716; KEGG: ana:all3972 hypothetical protein; PFAM: PilT protein domain protein; SPTR: All3972 protein.
 
    0.750
Chro_3811
PilT protein domain protein; PFAM: PIN domain; COGs: COG3744 conserved hypothetical protein; InterPro IPR002716; KEGG: cyt:cce_4226 hypothetical protein; PFAM: PilT protein domain protein; SPTR: PilT protein, N-terminal.
 
    0.729
Chro_1454
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Cyclic nucleotide-binding domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000595:IPR003594:IPR004358:IPR005467; KEGG: gvi:gll1661 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; cyclic nucleotide-binding; SMART: ATP-binding region ATPase domain protein; cyclic nucleotide-binding; SPTR: Gll1661 protein.
       0.636
Chro_1451
Response regulator receiver protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Response regulator receiver domain; COGs: COG0492 Thioredoxin reductase; InterPro IPR001789:IPR013027:IPR000103; KEGG: npu:Npun_R0589 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.497
Chro_1455
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR000639; KEGG: npu:Npun_R6557 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein.
       0.457
Chro_3384
PilT protein domain protein; PFAM: PIN domain; COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: cyn:Cyan7425_1159 PilT protein domain protein; PFAM: PilT protein domain protein; SPTR: Putative uncharacterized protein.
 
 
 
 0.427
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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