STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1590PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: cya:CYA_1762 drug exporter ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Drug exporter-1 ABC transporter (DrugE1) family, ATP-binding protein. (309 aa)    
Predicted Functional Partners:
Chro_1591
ABC-2 type transporter; InterPro IPR013525; KEGG: cyb:CYB_1205 putative ABC-2 type transporter, permease protein; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter superfamily.
 
     0.950
Chro_1683
PFAM: ABC transporter; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: ana:all4546 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter ATP-binding protein.
 
   
0.797
Chro_4059
ABC-2 type transporter; InterPro IPR013525; KEGG: ana:alr1620 permease protein of ABC transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter superfamily.
 
 
 0.743
Chro_2426
PFAM: ABC transporter; COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: npu:Npun_F2655 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related.
 
    
0.623
Chro_1918
PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR005876:IPR017871:IPR003439:IPR003593; KEGG: cyh:Cyan8802_0057 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Cobalt ABC transporter, ATPase subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit.
 
   
0.575
Chro_0141
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cyn:Cyan7425_4734 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein.
 
      0.557
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.553
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.536
atpG
ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.522
atpC
ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.508
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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