STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1622COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: npu:Npun_F3682 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein. (305 aa)    
Predicted Functional Partners:
Chro_1772
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: scl:sce5336 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Hydrolase, alpha/beta domain protein.
  
     0.766
Chro_1805
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: ava:Ava_3602 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold.
  
     0.730
Chro_1621
KEGG: npu:Npun_F3681 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.728
Chro_4881
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: npu:Npun_F3860 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein.
  
     0.646
Chro_3719
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR006162:IPR020845:IPR010071:IPR000873:IPR 006163:IPR001242:IPR009081; KEGG: ava:Ava_C0009 amino acid adenylation; PFAM: condensation domain protein; AMP-dependent synthetase and ligase; phosphopantetheine-binding; SPTR: Amino acid adenylation; TIGRFAM: amino acid adenylation domain protein.
   
 
 0.516
Chro_2576
PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme; COGs: COG3319 Thioesterase domains of type I polyketide synthase or non-ribosomal peptide synthetase; InterProIPR009081:IPR006162:IPR000873:IPR006163:IPR 001031; KEGG: npu:Npun_F3173 amino acid adenylation domain-containing protein; PFAM: Thioesterase; AMP-dependent synthetase and ligase; phosphopantetheine-binding; SPTR: Peptide synthetase.
   
 
 0.510
Chro_3660
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Alcohol dehydrogenase GroES-like domain; Nitroreductase family; Nonribosomal peptide synthase; AMP-binding enzyme; Condensation domain; Zinc-binding dehydrogenase; TIGRFAM: SagB-type dehydrogenase domain; amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR006162:IPR022272:IPR020845:IPR010071:IPR 013154:IPR013149:IPR006163:IPR001242:IPR013624:IPR000873:I PR000415:IPR009081; KEGG: cyt:cce_3073 peptide synthetase; PFAM: AMP-dependent synthetas [...]
  
 
 0.470
Chro_1924
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Luciferase-like monooxygenase; Formyl transferase; AMP-binding enzyme; Formyl transferase, C-terminal domain; TIGRFAM: natural product biosynthesis luciferase-like monooxygenase domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR009081:IPR002376:IPR005793:IPR 000873:IPR016048:IPR006163; KEGG: mxa:MXAN_2796 non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; formyl transferase domain protein; Luciferase-like, subgroup; phosphopan [...]
  
 
 0.423
Chro_3720
Beta-ketoacyl synthase; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR006162:IPR014030:IPR014031:IPR014043:IPR 013968:IPR006163:IPR009081; KEGG: npu:Npun_R3024 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; phosphopantetheine-binding; SPTR: JamP.
  
 
 0.402
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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