STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1781HAD superfamily (subfamily IA) hydrolase, TIGR01548; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548; COGs: COG0546 phosphatase; InterPro IPR010916:IPR005834:IPR006438; KEGG: npu:Npun_R4410 HAD family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD superfamily (Subfamily IA) hydrolase; TIGRFAM: HAD superfamily (subfamily IA) hydrolase, TIGR01548. (264 aa)    
Predicted Functional Partners:
Chro_3073
KEGG: npu:Npun_R4570 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.707
hisC
PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR005861:IPR004839; KEGG: ava:Ava_2242 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Histidinol-phosphate aminotransferase 2; TIGRFAM: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
  
 0.655
Chro_4122
Hypothetical protein; InterPro IPR020336; KEGG: npu:Npun_R0316 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.649
Chro_1468
KEGG: npu:Npun_F3852 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.606
Chro_1780
Ribosomal protein PSRP-3/Ycf65; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
 
     0.590
Chro_2583
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
     0.564
Chro_0900
KEGG: naz:Aazo_0132 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.547
Chro_3225
Hypothetical protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); KEGG: npu:Npun_R4658 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.540
Chro_1503
PFAM: Protein of unknown function (DUF3155); KEGG: naz:Aazo_2732 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.521
Chro_0760
PFAM: Homing endonuclease; TIGRFAM: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent; COGs: COG1372 Intein/homing endonuclease; InterProIPR006141:IPR004042:IPR006142:IPR013345:IPR 003587; KEGG: ana:all4035 hypothetical protein; SMART: Hedgehog/intein hint domain protein; SPTR: All4035 protein; TIGRFAM: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent.
  
     0.520
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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