STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1872PFAM: Protein of unknown function (DUF2499); InterPro IPR019634; KEGG: npu:Npun_R0053 hypothetical protein; PFAM: Protein of unknown function DUF2499; SPTR: Putative uncharacterized protein. (149 aa)    
Predicted Functional Partners:
Chro_1873
PFAM: Protein of unknown function (DUF3593); KEGG: npu:Npun_R0052 hypothetical protein; SPTR: Putative uncharacterized protein.
     0.986
Chro_0376
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR000634:IPR013026:IPR008629; KEGG: ter:Tery_1723 serine/threonine protein kinase; PFAM: GUN4 domain protein; SPTR: Serine/threonine kinase.
  
     0.773
Chro_5108
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: npu:Npun_F5475 GUN4 domain-containing protein; PFAM: GUN4 domain protein; SPTR: GUN4 domain protein.
  
     0.773
Chro_2435
Ferredoxin; COGs: COG1141 Ferredoxin; KEGG: npu:Npun_R0111 ferredoxin; SPTR: Ferredoxin.
  
     0.771
Chro_4859
PFAM: Protein of unknown function (DUF3007); KEGG: npu:Npun_F6622 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
Chro_0382
PFAM: Protein of unknown function (DUF1230); InterPro IPR009631; KEGG: naz:Aazo_2514 hypothetical protein; PFAM: protein of unknown function DUF1230; SPTR: Putative uncharacterized protein.
  
     0.768
Chro_1619
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
     0.768
Chro_0576
Protein of unknown function YGGT; PFAM: YGGT family; InterPro IPR003425; KEGG: npu:Npun_F5950 protein of unknown function YGGT; PFAM: protein of unknown function YGGT; SPTR: YGGT family, putative.
  
     0.766
psb28
PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; InterPro IPR005610; KEGG: naz:Aazo_0705 photosystem II reaction center protein Psb28; PFAM: photosystem II protein PsbW class I; SPTR: Photosystem II reaction center Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; Belongs to the Psb28 family.
  
     0.764
psaE
Photosystem I reaction centre subunit IV/PsaE; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.763
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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