STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2002PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: npu:Npun_F4828 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein. (215 aa)    
Predicted Functional Partners:
Chro_0633
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: ava:Ava_3926 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
   
 0.798
Chro_4318
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: npu:Npun_R5077 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
   
 0.792
Chro_4153
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyn:Cyan7425_1252 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.732
Chro_2654
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: npu:Npun_F5953 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.710
Chro_2293
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: syn:sll0488 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.699
Chro_5090
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_5058 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.698
Chro_0751
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: mar:MAE_16760 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.681
Chro_2003
Cysteine desulfurase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR010970:IPR000192; KEGG: npu:Npun_F4825 SufS subfamily cysteine desulfurase; PFAM: aminotransferase class V; SPTR: Cysteine desulfurase, SufS subfamily; TIGRFAM: cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
       0.620
Chro_2672
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: syn:sll1222 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.619
Chro_1327
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: gvi:glr2971 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.529
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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