STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Chro_2009PFAM: Glycosyl transferase family 2; PilZ domain; Cellulose synthase; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR003919:IPR001173; KEGG: cyn:Cyan7425_3398 cellulose synthase (UDP-forming); PFAM: glycosyl transferase family 2; SPTR: Cellulose synthase (UDP-forming). (757 aa)    
Predicted Functional Partners:
Chro_5323
PFAM: Sucrose synthase; Glycosyl transferases group 1; TIGRFAM: sucrose synthase; COGs: COG0438 Glycosyltransferase; InterPro IPR012820:IPR001296; KEGG: ava:Ava_2283 sucrose synthase, glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; PRIAM: Sucrose synthase; SPTR: Sucrose synthase, glycosyl transferase, group 1; TIGRFAM: sucrose synthase.
  
  
  0.911
Chro_0096
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR008089; KEGG: gvi:glr1068 nucleotide sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Nucleotide sugar epimerase.
   
 
  0.801
Chro_0220
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835:IPR013446; KEGG: npu:Npun_R1080 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate cytidylyltransferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase.
    
  0.801
Chro_0733
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR013446:IPR005835; KEGG: npu:Npun_R1080 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate cytidylyltransferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase.
    
  0.801
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
 
 0.801
Chro_2347
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); KEGG: gvi:gll2185 glucose-1-phosphate cytidylyltransferase; PRIAM: Glucose-1-phosphate cytidylyltransferase; SPTR: Gll2185 protein.
    
  0.801
Chro_2013
KEGG: npu:Npun_R5618 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.741
Chro_2269
PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: cyn:Cyan7425_5057 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase.
 
  
 0.566
Chro_2686
Periplasmic sensor diguanylate cyclase/phosphodiesterase; PFAM: EAL domain; GGDEF domain; CHASE4 domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000014:IPR000700:IPR001633:IPR000160:IPR 001610:IPR000215:IPR007892:IPR013767; KEGG: ppd:Ppro_2997 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; CHASE4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GG [...]
  
  
 0.447
Chro_4347
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain; HAMP domain; GGDEF domain; CHASE4 domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG2200 FOG: EAL domain; InterProIPR000014:IPR000700:IPR001633:IPR003660:IPR 000160:IPR001610:IPR007892:IPR013656; KEGG: npu:Npun_F5467 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; CHASE4 domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDE [...]
  
  
 0.447
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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