Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Chro_2012Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR006311:IPR000620; KEGG: ava:Ava_0610 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein. (350 aa)    
Predicted Functional Partners:
Chro_2011
KEGG: ana:alr1190 hypothetical protein; SPTR: Alr1190 protein.
       0.639
Chro_3385
Integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107:IPR002104; KEGG: syn:slr0733 integrase-recombinase protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Tyrosine recombinase xerC; Belongs to the 'phage' integrase family.
  
     0.589
Chro_2013
KEGG: npu:Npun_R5618 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.579
Chro_1837
PFAM: Domain of Unknown Function (DUF928); InterPro IPR010328; KEGG: ana:all7309 hypothetical protein; PFAM: protein of unknown function DUF928; SPTR: All7309 protein.
  
     0.573
Chro_3741
PFAM: Domain of Unknown Function (DUF928); InterPro IPR010328; KEGG: ana:all3179 hypothetical protein; PFAM: protein of unknown function DUF928; SPTR: All3179 protein.
  
     0.555
Chro_1916
KEGG: npu:Npun_F6211 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.512
Chro_3196
GAF modulated transcriptional regulator, LuxR family; PFAM: Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR003018; KEGG: ana:all7016 transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; GAF domain protein; SPTR: Transcriptional regulator.
  
     0.486
Chro_3740
PFAM: CHASE2 domain; COGs: COG4252 transmembrane sensor domain; InterPro IPR007890; KEGG: npu:Npun_F1637 putative CHASE2 sensor protein; PFAM: CHASE2 domain protein; SPTR: Putative Chase2 sensor protein.
  
     0.474
Chro_0367
PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; COGs: COG4719 conserved hypothetical protein; InterPro IPR014468:IPR001434; KEGG: npu:Npun_F0771 hypothetical protein; PFAM: protein of unknown function DUF11; SPTR: Conserved repeat domain protein; TIGRFAM: conserved repeat domain protein.
  
     0.470
Chro_0633
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: ava:Ava_3926 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.459
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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