STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2117KEGG: rmr:Rmar_2247 hypothetical protein; SPTR: Similar to Nter part of tr|Q3VXK8|Q3VXK8_9ACTO Hypothetical protein. (760 aa)    
Predicted Functional Partners:
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 0.982
Chro_2115
KEGG: ami:Amir_4143 von Willebrand factor type A; SPTR: von Willebrand factor type A.
     0.884
Chro_0789
KEGG: sco:SCO7170 secreted sugar hydrolase; SPTR: Secreted sugar hydrolase.
  
     0.770
Chro_3865
Helicase domain protein; PFAM: Methyltransferase small domain; InterPro IPR002296:IPR002052; KEGG: cyn:Cyan7425_5392 helicase domain protein; SPTR: Helicase domain protein.
  
     0.744
Chro_5009
PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: lpf:lpl1627 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Putative uncharacterized protein.
  
     0.741
Chro_3816
PFAM: Domain of Unknown Function (DUF748); Family of unknown function (DUF490); COGs: COG2911 conserved hypothetical protein; InterPro IPR000540:IPR007452; KEGG: npu:Npun_R0992 hypothetical protein; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein.
  
     0.716
Chro_0793
TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: cyn:Cyan7425_4953 methyltransferase FkbM family; SPTR: Methyltransferase FkbM family; TIGRFAM: methyltransferase FkbM family.
  
     0.714
Chro_2540
CheA signal transduction histidine kinase; PFAM: CheW-like domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR005467:IPR001789:IPR008207:IPR003594:IPR 004358:IPR002545; KEGG: cyc:PCC7424_1961 CheA signal transduction histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; CheW domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; SPTR: CheA signal transduction histidi [...]
  
     0.701
Chro_0834
Transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: ana:all1684 hypothetical protein; PFAM: transposase IS605 OrfB; SPTR: All1684 protein; TIGRFAM: transposase, IS605 OrfB family.
  
     0.694
Chro_2538
Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004010; KEGG: cyc:PCC7424_1959 methyl-accepting chemotaxis sensory transducer; PFAM: Cache domain protein; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Methyl-accepting chemotaxis sensory transducer.
  
     0.684
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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