STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Chro_2139TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: ana:all3144 hypothetical protein; PFAM: secretion protein HlyD family protein; SPTR: All3144 protein; TIGRFAM: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (492 aa)    
Predicted Functional Partners:
Chro_2138
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036:IPR000731; KEGG: ava:Ava_3838 hydrophobe/amphiphile efflux-1 HAE1; PFAM: acriflavin resistance protein; SPTR: Hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.939
Chro_1996
PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: npu:Npun_F6385 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Outer membrane efflux protein.
 
 
 0.890
Chro_4449
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: npu:Npun_F4015 hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: acriflavin resistance protein; SPTR: Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.855
Chro_2777
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: ava:Ava_3838 hydrophobe/amphiphile efflux-1 HAE1; PFAM: acriflavin resistance protein; SPTR: Hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.854
Chro_2410
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: mar:MAE_36130 RND multidrug efflux transporter; PFAM: acriflavin resistance protein; SPTR: RND multidrug efflux transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.852
Chro_3294
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: mar:MAE_36130 RND multidrug efflux transporter; PFAM: acriflavin resistance protein; SPTR: RND multidrug efflux transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.852
Chro_3036
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR001036:IPR004763; KEGG: ana:all7631 cation efflux system protein; PFAM: acriflavin resistance protein; SPTR: Cation efflux system protein; TIGRFAM: heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.780
Chro_4464
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: cyt:cce_2004 AcrB/AcrD/AcrF family protein; PFAM: acriflavin resistance protein; SPTR: AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.727
Chro_1286
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: ava:Ava_2544 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.675
Chro_4405
PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896:IPR017900:IPR002880:IPR019752:IPR 019456:IPR011766:IPR011895; KEGG: cyc:PCC7424_1261 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate [...]
   
   0.570
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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