STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2334PFAM: Protein of unknown function (DUF3571); KEGG: npu:Npun_R5762 hypothetical protein; SPTR: Putative uncharacterized protein. (85 aa)    
Predicted Functional Partners:
Chro_1419
PFAM: Domain of unknown function (DUF1817); COGs: COG5474 conserved hypothetical protein; InterPro IPR014946; KEGG: naz:Aazo_0313 hypothetical protein; PFAM: Domain of unknown function DUF1817; SPTR: Putative uncharacterized protein.
  
   
 0.818
Chro_5465
PFAM: Protein of unknown function (DUF3143); KEGG: ana:asr2994 hypothetical protein; SPTR: Asr2994 protein.
  
     0.774
ndhN
Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.773
Chro_2335
Hedgehog/intein hint domain protein; PFAM: Protein of unknown function (DUF1557); InterPro IPR006141:IPR003587; KEGG: isc:IscW_ISCW014306 E3 ubiquitin ligase, putative; SMART: Hedgehog/intein hint domain protein; SPTR: E3 ubiquitin ligase, putative.
       0.773
Chro_4927
PFAM: Protein of unknown function (DUF3252); KEGG: ava:Ava_4585 hypothetical protein; SPTR: Asr0654 protein.
  
     0.773
Chro_1386
PFAM: Protein of unknown function (DUF2488); InterPro IPR019616; KEGG: ana:all0216 hypothetical protein; PFAM: Protein of unknown function DUF2488; SPTR: Putative uncharacterized protein.
  
     0.769
Chro_1964
High light inducible protein; PFAM: Chlorophyll A-B binding protein; KEGG: npu:Npun_R6375 high light inducible protein; SPTR: CAB/ELIP/HLIP superfamily of protein.
  
     0.769
Chro_2510
High light inducible protein; PFAM: Chlorophyll A-B binding protein; KEGG: ava:Ava_1411 high light inducible protein; SPTR: CAB/ELIP/HLIP superfamily of protein.
  
     0.765
ndhM
NAD(P)H-quinone oxidoreductase subunit M; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.765
Chro_1462
Heat shock protein DnaJ domain protein; PFAM: Protein of unknown function (DUF3353); InterPro IPR001623; KEGG: ana:all3259 hypothetical protein; PFAM: heat shock protein DnaJ domain protein; SPTR: All3259 protein.
  
     0.761
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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