STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2377PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyn:Cyan7425_1728 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2. (304 aa)    
Predicted Functional Partners:
Chro_2378
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyp:PCC8801_1151 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1.
 
    0.780
Chro_1633
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: ava:Ava_2064 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2.
  
     0.768
Chro_1375
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: ter:Tery_3753 methyltransferase type 11; PFAM: glycosyl transferase family 2; SPTR: Methyltransferase type 11.
  
     0.766
Chro_4806
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: chu:CHU_0884 b-glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, group 2 family protein.
  
     0.709
Chro_2376
KEGG: saq:Sare_4028 transcription termination factor Rho; SPTR: Transcription termination factor Rho.
  
   0.577
Chro_2379
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: naz:Aazo_4909 group 1 glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein.
  
    0.526
Chro_2381
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: npu:Npun_R2877 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2.
 
    
0.514
Chro_1572
Methyltransferase type 11; PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: mma:MM_2103 putative methyltransferase; PFAM: Methyltransferase type 11; SPTR: Putative methyltransferase.
 
    0.437
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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