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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2409Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator; COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: bmd:BMD_1530 LysE family translocator protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Translocator protein, LysE family. (200 aa)    
Predicted Functional Partners:
Chro_0612
COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; KEGG: cyh:Cyan8802_0954 CheC, inhibitor of MCP methylation; SPTR: CheC-like family; manually curated.
    
   0.541
Chro_5155
Transcriptional regulator, AraC family; PFAM: AraC-like ligand binding domain; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018062:IPR018060; KEGG: hau:Haur_0091 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family.
 
     0.424
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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