STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Chro_2459PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006046:IPR006047:IPR006589; KEGG: cyc:PCC7424_4716 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase catalytic region. (461 aa)    
Predicted Functional Partners:
Chro_1515
Trehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase-fused probable maltokinase; trehalose synthase; COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589:IPR012810:IPR012811; KEGG: cyc:PCC7424_2917 trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase family protein; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase.
 
 0.971
Chro_1513
Isoamylase; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX; COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR004193:IPR006047:IPR006589:IPR011837; KEGG: npu:Npun_R4708 glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.931
Chro_2179
Isoamylase; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX; COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR011837:IPR004193:IPR006047:IPR006589; KEGG: mac:MA2000 glycogen debranching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.931
Chro_4545
Isoamylase; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX; COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR006589:IPR004193:IPR006047:IPR011837; KEGG: syd:Syncc9605_0815 glycogen debranching protein GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase [...]
 
 
 0.931
Chro_1116
PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR004193:IPR006047:IPR006048:IPR006589; KEGG: npu:Npun_R2048 alpha amylase, C-terminal all-beta; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase, C-terminal all-beta.
  
 
 0.926
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.926
Chro_5322
PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterProIPR006589:IPR012768:IPR004193:IPR006047:IPR 006048; KEGG: npu:Npun_R1027 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; SPTR: Malto-oligosyltrehalose trehalohydrolase; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.926
Chro_1236
Alpha-glucosidase; PFAM: Glycosyl hydrolases family 31; COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: ana:alr4773 alpha-glucosidase; PFAM: glycoside hydrolase family 31; PRIAM: Alpha-glucosidase; SPTR: Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.923
Chro_0395
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.922
Chro_1510
PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases; COGs: COG0058 Glucan phosphorylase; InterPro IPR000811:IPR011834; KEGG: ana:all2806 hypothetical protein; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: All2806 protein; TIGRFAM: alpha-glucan phosphorylase.
  
 0.922
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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