STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2488PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dfe:Dfer_4020 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1. (389 aa)    
Predicted Functional Partners:
Chro_2487
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mgm:Mmc1_0171 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein.
       0.773
Chro_1581
Hypothetical protein; InterPro IPR001226; KEGG: sti:Sthe_2945 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.746
Chro_0707
PFAM: Core-2/I-Branching enzyme; InterPro IPR021141; KEGG: dfe:Dfer_0169 glycosyl transferase family 14; PFAM: Core-2/I-Branching enzyme; SPTR: Putative uncharacterized protein.
  
    0.644
Chro_1846
Integrase family protein; PFAM: Domain of unknown function (DUF3596); Phage integrase family; InterPro IPR002104; KEGG: cyt:cce_0721 hypothetical protein; PFAM: integrase family protein; SPTR: Putative uncharacterized protein.
  
     0.624
Chro_0023
PAS fold-4 domain protein; PFAM: PAS fold; InterPro IPR013656; KEGG: ava:Ava_4084 PepSY-associated TM helix; PFAM: PAS fold-4 domain protein; SPTR: PepSY-associated TM helix.
  
     0.571
Chro_2489
Hypothetical protein; KEGG: tdn:Suden_0309 chorismate mutase; SPTR: Peroxisome assembly protein 12.
       0.563
Chro_0735
PFAM: Glycosyltransferase family 28 C-terminal domain; COGs: COG5017 conserved hypothetical protein; InterPro IPR007235; KEGG: cyn:Cyan7425_5182 glycosyltransferase 28 domain protein; PFAM: Glycosyltransferase 28 domain; SPTR: Glycosyltransferase 28 domain protein.
 
   
 0.556
Chro_0934
KEGG: cyh:Cyan8802_4017 SMP-30/gluconolaconase/LRE domain protein; SPTR: SMP-30/Gluconolaconase/LRE domain protein.
  
     0.546
Chro_3804
PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cyc:PCC7424_5582 integrase family protein; PFAM: integrase family protein; SPTR: Integrase family protein.
  
     0.524
Chro_0151
Methyltransferase type 12; InterPro IPR013217; KEGG: amr:AM1_1907 methyltransferase, putative; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 12.
  
     0.500
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.