STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2526KEGG: ava:Ava_4792 hypothetical protein; SPTR: Putative uncharacterized protein. (230 aa)    
Predicted Functional Partners:
ndhH
NADH dehydrogenase subunit D; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
    
 
 0.648
Chro_0060
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein; InterPro IPR010220; KEGG: ava:Ava_0747 CO2 hydration; PFAM: CO2 hydration family protein; SPTR: CO2 hydration; TIGRFAM: CO2 hydration protein.
    
   0.553
Chro_1013
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein; InterPro IPR010220; KEGG: ava:Ava_4475 CO2 hydration; PFAM: CO2 hydration family protein; SPTR: CO2 hydration; TIGRFAM: CO2 hydration protein.
    
   0.553
Chro_2527
KEGG: ava:Ava_3395 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.478
Chro_3831
S-layer domain-containing protein; PFAM: S-layer homology domain; InterPro IPR001119; KEGG: ava:Ava_4824 beta-Ig-H3/fasciclin; PFAM: S-layer domain-containing protein; SPTR: Beta-Ig-H3/fasciclin.
 
      0.419
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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