STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2627Hypothetical protein; PFAM: PIN domain; KEGG: syp:SYNPCC7002_F0004 hypothetical protein; SPTR: Putative uncharacterized protein. (120 aa)    
Predicted Functional Partners:
Chro_2626
Hypothetical protein; PFAM: HicB family; KEGG: syp:SYNPCC7002_F0005 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.590
Chro_4358
Adenine specific DNA methyltransferase; PFAM: N-6 DNA Methylase; COGs: COG4889 helicase; InterPro IPR002296:IPR002052; KEGG: cyp:PCC8801_1662 adenine specific DNA methyltransferase; SPTR: Helicase domain protein.
  
     0.568
Chro_4079
Adenine specific DNA methyltransferase; PFAM: N-6 DNA Methylase; COGs: COG4889 helicase; InterPro IPR002296:IPR002052; KEGG: mar:MAE_08180 adenine specific DNA methyltransferase; SPTR: Helicase domain protein.
  
     0.567
Chro_2628
PFAM: Cytochrome c; InterPro IPR009056:IPR003088; KEGG: ava:Ava_4020 cytochrome c, class I; PFAM: cytochrome c class I; SPTR: Cytochrome; manually curated.
       0.508
Chro_2273
PFAM: Uncharacterised protein family (UPF0175); KEGG: cyh:Cyan8802_4641 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.489
Chro_1669
PFAM: Protein of unknown function (DUF433); COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: gvi:gll2956 hypothetical protein; PFAM: protein of unknown function DUF433; SPTR: Putative uncharacterized protein.
  
   
 0.486
Chro_3877
Hypothetical protein; PFAM: Domain of unknown function (DUF3368); COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: ava:Ava_1354 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.443
Chro_1668
KEGG: mar:MAE_07550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.438
Chro_3532
Glycosyl transferase family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: cyh:Cyan8802_4007 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; PFAM: glycosyl transferase family 39; SPTR: Putative uncharacterized protein.
  
     0.430
Chro_2284
PilT protein domain protein; PFAM: PIN domain; COGs: COG3744 conserved hypothetical protein; InterPro IPR002716; KEGG: cyn:Cyan7425_0121 PilT protein domain protein; PFAM: PilT protein domain protein; SPTR: PilT protein domain protein.
  
   
 0.410
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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