STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2650PFAM: Histone deacetylase domain; COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: ana:all0839 hypothetical protein; PFAM: histone deacetylase superfamily; SPTR: All0839 protein. (304 aa)    
Predicted Functional Partners:
Chro_5010
Nuclear protein SET; InterPro IPR001214; KEGG: bbe:BBR47_55500 hypothetical protein; SMART: nuclear protein SET; SPTR: Putative uncharacterized protein.
  
 0.859
Chro_5098
ATP-binding region ATPase domain protein; Molecular chaperone. Has ATPase activity.
    
 0.803
Chro_4556
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR013026:IPR001440; KEGG: amr:AM1_4591 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide repeat domain protein.
   
 0.750
Chro_1219
PFAM: ATPase family associated with various cellular activities (AAA); Tetratricopeptide repeat; COGs: COG0464 ATPase of the AAA+ class; InterProIPR003959:IPR019734:IPR013026:IPR003960:IPR 003593; KEGG: ote:Oter_1429 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; Tetratricopeptide repeat; SPTR: AAA ATPase central domain protein.
   
 0.673
Chro_0255
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959:IPR003593; KEGG: ana:all4296 hypothetical protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: All4296 protein.
   
 0.662
Chro_4419
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: npu:Npun_F0518 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: AAA ATPase, central region.
   
 0.662
Chro_0634
Amine oxidase; PFAM: Flavin containing amine oxidoreductase; COGs: COG1231 Monoamine oxidase; InterPro IPR001613:IPR002937; KEGG: rop:ROP_04530 flavin-containing amine oxidase; PFAM: amine oxidase; SPTR: Flavin-containing amine oxidase.
   
 0.624
Chro_0672
L-amino-acid oxidase; PFAM: Flavin containing amine oxidoreductase; COGs: COG1231 Monoamine oxidase; InterPro IPR002937; KEGG: cyh:Cyan8802_2643 amine oxidase; PFAM: amine oxidase; PRIAM: L-amino-acid oxidase; SPTR: Amine oxidase.
   
 0.624
Chro_2389
Amine oxidase; PFAM: Flavin containing amine oxidoreductase; COGs: COG1231 Monoamine oxidase; InterPro IPR001613:IPR002937; KEGG: dfe:Dfer_5079 amine oxidase; PFAM: amine oxidase; SPTR: Amine oxidase.
   
 0.624
Chro_4351
Amine oxidase; PFAM: Flavin containing amine oxidoreductase; COGs: COG1231 Monoamine oxidase; InterPro IPR000759:IPR002937; KEGG: cwo:Cwoe_4445 amine oxidase; PFAM: amine oxidase; SPTR: Putative uncharacterized protein.
   
 0.624
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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