STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Chro_2716Nitrate ABC transporter, periplasmic substrate-binding protein putative; PFAM: NMT1/THI5 like; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: amr:AM1_5168 nitrate ABC transporter, periplasmic substrate-binding protein putative; SPTR: Nitrate ABC transporter, periplasmic substrate-binding protein putative. (533 aa)    
Predicted Functional Partners:
Chro_2717
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515:IPR005889; KEGG: amr:AM1_5167 nitrate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Nitrate ABC transporter, inner membrane subunit; TIGRFAM: nitrate ABC transporter, inner membrane subunit.
 
 0.996
Chro_2718
PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR003593:IPR005890:IPR017871; KEGG: syp:SYNPCC7002_A0862 sulfonate/nitrate transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Sulfonate/nitrate transport system ATP-binding protein; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D.
 
 0.992
Chro_3570
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR005889:IPR000515; KEGG: ava:Ava_4541 nitrate transport permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Nitrate transport permease; TIGRFAM: nitrate ABC transporter, inner membrane subunit.
 
 0.985
Chro_3574
Assimilatory nitrate reductase (ferredoxin) precursor; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963:IPR006656:IPR006657; KEGG: ava:Ava_4544 assimilatory nitrate reductase (ferredoxin) precursor; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: Assimilatory nitrate reductase (Ferredoxin); Belongs to the prokaryotic molybdopterin-containing oxi [...]
 
  
 0.952
Chro_3571
PFAM: ABC transporter; NMT1/THI5 like; TIGRFAM: nitrate transport ATP-binding subunits C and D; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871:IPR005890:IPR003439:IPR003593; KEGG: cyc:PCC7424_3525 nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D.
 
 
0.948
Chro_3569
Nitrate transport protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR017909; KEGG: cyc:PCC7424_3527 nitrate transport protein; SPTR: Nitrate transport protein.
  
  
 
0.919
Chro_3572
PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871:IPR005890:IPR003439:IPR003593; KEGG: ana:alr0611 nitrate transport ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Nitrate transport ATP-binding protein; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D.
  
 0.865
Chro_0903
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515:IPR005889; KEGG: npu:Npun_R2355 nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Nitrate ABC transporter, inner membrane subunit; TIGRFAM: nitrate ABC transporter, inner membrane subunit.
  
 0.864
Chro_0905
PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR005890:IPR003593:IPR017871; KEGG: npu:Npun_R2353 nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D.
  
 0.863
Chro_4743
PFAM: ABC transporter; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: amr:AM1_2838 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related.
  
 0.694
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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