STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2720KEGG: ava:Ava_0174 hypothetical protein; SPTR: Asl2353 protein. (99 aa)    
Predicted Functional Partners:
Chro_1221
KEGG: ava:Ava_2085 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
Chro_0022
KEGG: ava:Ava_0202 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.763
Chro_1630
KEGG: npu:Npun_R5568 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.761
Chro_3410
PFAM: CpcD/allophycocyanin linker domain; InterPro IPR008213; KEGG: naz:Aazo_3486 CpcD phycobilisome linker domain-containing protein; PFAM: CpcD phycobilisome linker domain protein; SPTR: CpcD phycobilisome linker-like protein.
  
     0.761
Chro_3409
PFAM: CpcD/allophycocyanin linker domain; InterPro IPR008213; KEGG: tel:tsr1960 phycocyanin-associated 7.8kDa rod linker protein; PFAM: CpcD phycobilisome linker domain protein; SPTR: Phycocyanin-associated 7.8kDa rod linker protein.
  
     0.760
Chro_4969
PFAM: Protein of unknown function (DUF3153); KEGG: npu:Npun_R6286 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.749
Chro_5299
KEGG: naz:Aazo_0918 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.728
Chro_4981
KEGG: naz:Aazo_3537 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.727
Chro_0305
KEGG: ava:Ava_4430 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.726
Chro_4705
KEGG: ava:Ava_1978 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.726
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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