STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_2966PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain; InterPro IPR000415:IPR020051; KEGG: cyc:PCC7424_0254 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; TIGRFAM: SagB-type dehydrogenase domain. (511 aa)    
Predicted Functional Partners:
Chro_4597
InterPro IPR004365; KEGG: ava:Ava_3959 hypothetical protein; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Putative uncharacterized protein.
  
   
 0.716
Chro_5559
Hypothetical protein; COGs: COG5635 NTPase (NACHT family); KEGG: amr:AM1_4123 signal transduction protein; SPTR: Signal transduction protein with Nacht domain, putative.
  
     0.673
Chro_2962
KEGG: ava:Ava_3063 hypothetical protein; SPTR: All0298 protein.
  
     0.643
Chro_5153
KEGG: npu:Npun_R5777 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.626
Chro_3131
Putative signal transduction protein with Nacht domain; PFAM: NACHT domain; COGs: COG5635 NTPase (NACHT family); InterPro IPR007111; KEGG: amr:AM1_4123 signal transduction protein; SPTR: NACHT domain family.
  
     0.614
Chro_2878
KEGG: cyc:PCC7424_3802 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.598
Chro_0895
KEGG: npu:Npun_R4477 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.593
Chro_2136
Putative signal transduction protein with Nacht domain; PFAM: NACHT domain; COGs: COG5635 NTPase (NACHT family); InterPro IPR007111; KEGG: mar:MAE_29460 hypothetical protein; SPTR: NACHT domain family.
  
     0.587
Chro_2963
PFAM: Phosphoribosyltransferase; TIGRFAM: TIGR00303 family protein; COGs: COG2038 NaMN:DMB phosphoribosyltransferase; InterPro IPR003200:IPR002805; KEGG: cyn:Cyan7425_0342 hypothetical protein; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; SPTR: UPF0284 protein Cyan7425_0342; Belongs to the UPF0284 family.
 
  
 0.570
Chro_3448
PFAM: Orange carotenoid protein, N-terminal; InterPro IPR015233; KEGG: ava:Ava_2230 hypothetical protein; PFAM: Orange carotenoid-binding protein; SPTR: Putative uncharacterized protein.
  
     0.568
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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