STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3075Hypothetical protein; PFAM: ADP-ribosylglycohydrolase; KEGG: npu:Npun_R4568 hypothetical protein; SPTR: Putative uncharacterized protein. (292 aa)    
Predicted Functional Partners:
Chro_3073
KEGG: npu:Npun_R4570 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.867
Chro_2830
PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187:IPR002332:IPR017918; KEGG: ava:Ava_0137 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.837
Chro_5092
KEGG: npu:Npun_F1010 nitrogen regulatory protein P-II; SPTR: Nitrogen regulatory protein P-II.
   
 
 0.837
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.785
Chro_0414
KEGG: npu:Npun_R1321 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.775
Chro_5428
PFAM: DALR anticodon binding domain; InterPro IPR008909; KEGG: ava:Ava_1751 arginyl tRNA synthetase anticodon binding; PFAM: DALR anticodon binding domain protein; SPTR: Arginyl tRNA synthetase anticodon binding.
 
     0.773
Chro_2496
KEGG: npu:Npun_R3785 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.764
Chro_4884
PFAM: Protein of unknown function (DUF1049); KEGG: npu:Npun_F6224 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.760
Chro_2677
TIGRFAM: DGQHR domain; InterPro IPR017601; KEGG: npu:Npun_R4490 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DGQHR domain protein.
  
     0.738
Chro_0895
KEGG: npu:Npun_R4477 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.729
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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