STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3122KEGG: ana:all0421 hypothetical protein; SPTR: Putative uncharacterized protein. (232 aa)    
Predicted Functional Partners:
Chro_3123
TatD-related deoxyribonuclease; PFAM: TatD related DNase; COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001130:IPR012022; KEGG: npu:Npun_F5233 TatD-related deoxyribonuclease; PFAM: TatD-related deoxyribonuclease; SPTR: TatD-related deoxyribonuclease.
 
   
 0.923
Chro_3124
PFAM: UbiA prenyltransferase family; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537; KEGG: ana:all0419 hypothetical protein; PFAM: UbiA prenyltransferase; SPTR: All0419 protein.
 
   
 0.869
Chro_3130
PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: npu:Npun_F5236 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase.
 
   
 0.833
Chro_3128
Hypothetical protein; InterPro IPR018246; KEGG: npu:Npun_F5235 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.832
Chro_3127
PFAM: 3-dehydroquinate synthase; COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR000209:IPR002658:IPR016303; KEGG: npu:Npun_R1267 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase.
 
   
 0.828
Chro_3120
Protein of unknown function DUF1555; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM protein sorting domain; PEP-CTERM protein sorting domain, cyanobacterial subclass; InterPro IPR011449:IPR013424; KEGG: ana:all0423 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: All0423 protein.
 
     0.564
Chro_3121
PFAM: NHL repeat; TIGRFAM: PEP-CTERM protein sorting domain; COGs: COG3391 conserved hypothetical protein; InterPro IPR001258:IPR013017:IPR013424; KEGG: npu:Npun_R1271 hypothetical protein; PFAM: NHL repeat containing protein; SPTR: Putative uncharacterized protein.
     
 0.485
Chro_2687
KEGG: cyc:PCC7424_4085 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.459
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.