STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3132PFAM: UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; COGs: COG0562 UDP-galactopyranose mutase; InterPro IPR013027:IPR015899:IPR004379; KEGG: naz:Aazo_0516 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: UDP-galactopyranose mutase; SPTR: UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase. (378 aa)    
Predicted Functional Partners:
Chro_1203
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR001509; KEGG: rrs:RoseRS_2395 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase.
    
 0.918
Chro_4221
UDP-galactose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886:IPR001509; KEGG: npu:Npun_R4141 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.918
Chro_0227
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR020904; KEGG: nde:NIDE2883 putative dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucose 4-epimerase.
  
 
 0.913
Chro_0801
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cyc:PCC7424_5776 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase.
  
 
 0.913
Chro_4636
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cyn:Cyan7425_2184 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase.
  
 
 0.913
Chro_4817
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cyc:PCC7424_5776 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase.
  
 
 0.913
Chro_1275
PFAM: UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; COGs: COG0562 UDP-galactopyranose mutase; InterPro IPR013027:IPR015899:IPR004379; KEGG: cyn:Cyan7425_2020 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: UDP-galactopyranose mutase; SPTR: UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase.
  
  
 
0.900
Chro_3133
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: naz:Aazo_0517 family 2 glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Putative glycosyltransferase.
 
    0.844
Chro_3134
Hypothetical protein; PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR022272; KEGG: naz:Aazo_0517 family 2 glycosyl transferase; SPTR: Putative glycosyltransferase.
 
    0.816
Chro_0225
PFAM: Nucleotidyl transferase; COGs: COG1209 dTDP-glucose pyrophosphorylase; KEGG: nde:NIDE2211 putative nucleotidyl transferase; SPTR: Nucleotidyl transferase.
  
  
 0.739
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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