STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3206PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: npu:Npun_R4276 fatty acid desaturase; PFAM: fatty acid desaturase; SPTR: Fatty acid desaturase. (310 aa)    
Predicted Functional Partners:
Chro_2833
PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: npu:Npun_F4798 fatty acid desaturase; PFAM: fatty acid desaturase; SPTR: Fatty acid desaturase.
     
 0.920
Chro_1783
Glycosyltransferase, MGT family; PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family; COGs: COG1819 Glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR002213:IPR006326; KEGG: nhl:Nhal_2738 glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; SPTR: Glycosyltransferase, MGT family; TIGRFAM: glycosyltransferase, MGT family.
    
 0.918
Chro_0094
FAD dependent oxidoreductase; InterPro IPR006076; KEGG: npu:Npun_R4207 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein.
   
 
 0.916
Chro_5475
PFAM: FAD dependent oxidoreductase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR000759:IPR006076:IPR000172; KEGG: npu:Npun_F3745 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; glucose-methanol-choline oxidoreductase; SPTR: FAD dependent oxidoreductase.
    
 0.904
Chro_4091
UDP-galactopyranose mutase; PFAM: Flavin containing amine oxidoreductase; Rieske [2Fe-2S] domain; COGs: COG3349 conserved hypothetical protein; InterProIPR017941:IPR005805:IPR000759:IPR000834:IPR 002937; KEGG: ana:alr2785 hypothetical protein; PFAM: amine oxidase; Rieske [2Fe-2S] iron-sulphur domain; SPTR: Alr2785 protein.
     
 0.903
Chro_5277
Hypothetical protein; COGs: COG0644 Dehydrogenase (flavoprotein); KEGG: ava:Ava_3214 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.902
Chro_0378
PFAM: Protein of unknown function (DUF3318); KEGG: ava:Ava_0742 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
Chro_1310
PFAM: Protein of unknown function (DUF2996); KEGG: npu:Npun_F6444 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.763
Chro_3542
PFAM: Protein of unknown function (DUF3177); KEGG: npu:Npun_R0714 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.746
Chro_2737
KEGG: cyn:Cyan7425_3406 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.726
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.