STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3288Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; InterPro IPR002198; KEGG: amr:AM1_6141 3-oxoacyl-(acyl carrier protein) reductase, putative; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl carrier protein) reductase, putative. (95 aa)    
Predicted Functional Partners:
Chro_3287
PFAM: Antibiotic biosynthesis monooxygenase; InterPro IPR007138; KEGG: fal:FRAAL2473 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein.
  
    0.572
Chro_1742
PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR018356:IPR014036; KEGG: npu:Npun_R4395 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: Transcriptional regulator, DeoR family.
 
  
 0.495
Chro_3289
ThiJ/PfpI domain-containing protein; PFAM: DJ-1/PfpI family; COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR002818; KEGG: sen:SACE_3467 DJ-1/PfpI family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Chaperone protein hchA.
  
    0.451
Chro_1924
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Luciferase-like monooxygenase; Formyl transferase; AMP-binding enzyme; Formyl transferase, C-terminal domain; TIGRFAM: natural product biosynthesis luciferase-like monooxygenase domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR009081:IPR002376:IPR005793:IPR 000873:IPR016048:IPR006163; KEGG: mxa:MXAN_2796 non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; formyl transferase domain protein; Luciferase-like, subgroup; phosphopan [...]
  
 
 0.429
Chro_0690
PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR004410:IPR014043; KEGG: ana:alr0240 acyl-carrier-protein S-malonyltransferase; PFAM: Acyl transferase; SPTR: Malonyl coenzyme A-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.
  
 
 0.420
Chro_2576
PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme; COGs: COG3319 Thioesterase domains of type I polyketide synthase or non-ribosomal peptide synthetase; InterProIPR009081:IPR006162:IPR000873:IPR006163:IPR 001031; KEGG: npu:Npun_F3173 amino acid adenylation domain-containing protein; PFAM: Thioesterase; AMP-dependent synthetase and ligase; phosphopantetheine-binding; SPTR: Peptide synthetase.
  
 
 0.420
Chro_0876
PFAM: Glycosyl transferase family 2; Glycosyl hydrolases family 2, TIM barrel domain; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR006103:IPR001173; KEGG: sfu:Sfum_3546 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; glycoside hydrolase family 2 TIM barrel; SPTR: Glycosyl transferase, family 2.
  
 
 0.418
Chro_2349
PFAM: Glycosyl transferase family 2; Glycosyl hydrolases family 2, TIM barrel domain; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR006103:IPR001173; KEGG: dma:DMR_13080 putative glycosyltransferase; PFAM: glycosyl transferase family 2; glycoside hydrolase family 2 TIM barrel; SPTR: Putative glycosyltransferase.
  
 
 0.418
Chro_3663
Beta-ketoacyl synthase; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR018201:IPR014030:IPR014031:IPR014043:IPR 013968:IPR006163:IPR009081; KEGG: npu:Npun_R3425 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; phosphopantetheine-binding; SPTR: Beta-ketoacyl synthase.
  
 
 0.407
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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