STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3381Transcriptional regulator/antitoxin, MazE; PFAM: SpoVT / AbrB like domain; COGs: COG2336 Growth regulator; InterPro IPR007159; KEGG: mar:MAE_02330 PemI-like suppressor; PFAM: SpoVT/AbrB domain-containing protein; SPTR: PemI-like suppressor. (78 aa)    
Predicted Functional Partners:
Chro_3382
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein; COGs: COG2337 Growth inhibitor; InterPro IPR003477; KEGG: cyn:Cyan7425_1017 transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; SPTR: Transcriptional modulator of MazE/toxin, MazF.
 
 
 0.985
Chro_0886
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
 
 
 0.776
Chro_3384
PilT protein domain protein; PFAM: PIN domain; COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: cyn:Cyan7425_1159 PilT protein domain protein; PFAM: PilT protein domain protein; SPTR: Putative uncharacterized protein.
 
   
 0.747
Chro_3383
Protein of unknown function DUF2191; PFAM: Uncharacterized protein conserved in bacteria (DUF2191); InterPro IPR019239; KEGG: gvi:gsl2900 hypothetical protein; PFAM: Protein of unknown function DUF2191; SPTR: Gsl2900 protein.
 
     0.674
Chro_1653
KEGG: ana:all0337 hypothetical protein; SPTR: All0337 protein.
  
 
 0.652
Chro_2766
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.652
Chro_3421
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein; COGs: COG2337 Growth inhibitor; InterPro IPR003477; KEGG: cyn:Cyan7425_3432 transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; SPTR: Transcriptional modulator of MazE/toxin, MazF.
  
 
 0.652
Chro_4311
PFAM: PemK-like protein; KEGG: ava:Ava_2408 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.652
Chro_4369
PFAM: PemK-like protein; KEGG: rrs:RoseRS_2934 transcriptional modulator of MazE/toxin, MazF; SPTR: Transcriptional modulator of MazE/toxin, MazF.
  
 
 0.652
Chro_3380
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR000639; KEGG: ava:Ava_4708 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold.
       0.551
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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