STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3448PFAM: Orange carotenoid protein, N-terminal; InterPro IPR015233; KEGG: ava:Ava_2230 hypothetical protein; PFAM: Orange carotenoid-binding protein; SPTR: Putative uncharacterized protein. (173 aa)    
Predicted Functional Partners:
Chro_3449
Nuclear transport factor 2; InterPro IPR002075; KEGG: ana:all4940 hypothetical protein; PFAM: nuclear transport factor 2; SPTR: All4940 protein.
     0.988
Chro_4319
PFAM: Phycobilisome protein; Phycobilisome Linker polypeptide; InterPro IPR001297:IPR012128; KEGG: ava:Ava_2620 phycobilisome protein; PFAM: Phycobilisome linker polypeptide; Phycocyanin; SPTR: Phycobilisome protein; Belongs to the phycobilisome linker protein family.
  
 
   0.771
Chro_1075
Hypothetical protein; PFAM: Phosphate-starvation-inducible E; COGs: COG3431 membrane protein; KEGG: ana:alr1752 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.715
Chro_1035
PFAM: Phycobilisome protein; Phycobilisome Linker polypeptide; InterPro IPR001297:IPR012128; KEGG: npu:Npun_R4843 phycobilisome linker polypeptide ApcE; PFAM: Phycobilisome linker polypeptide; Phycocyanin; SPTR: Phycobilisome linker polypeptide ApcE; Belongs to the phycobilisome linker protein family.
  
 
   0.703
Chro_5153
KEGG: npu:Npun_R5777 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.695
Chro_2992
KEGG: npu:Npun_R3867 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.692
Chro_0480
Hypothetical protein; PFAM: Phosphate-starvation-inducible E; COGs: COG3431 membrane protein; KEGG: syp:SYNPCC7002_A2492 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.691
Chro_1187
Protein of unknown function DUF187; PFAM: Uncharacterised BCR, COG1649; COGs: COG1649 conserved hypothetical protein; InterPro IPR003790; KEGG: npu:Npun_R6309 hypothetical protein; PFAM: protein of unknown function DUF187; SPTR: Putative uncharacterized protein.
  
     0.673
Chro_1142
KEGG: npu:Npun_R0165 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.671
Chro_4322
Phycobilisome core linker protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
   0.667
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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