STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3688PFAM: Protein of unknown function (DUF3102); KEGG: cyt:cce_3069 hypothetical protein; SPTR: Putative uncharacterized protein. (349 aa)    
Predicted Functional Partners:
rsmG
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.646
Chro_2243
Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR019810; KEGG: cyn:Cyan7425_3304 cobyrinic acid ac-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase.
  
 
 0.582
Chro_3170
Cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: npu:Npun_R1483 cobyrinic acid a,c-diamide synthase; SPTR: Cobyrinic acid a,c-diamide synthase.
  
 
 0.582
Chro_3332
Restriction endonuclease; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Restriction endonuclease; COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: cyh:Cyan8802_0367 restriction endonuclease; SPTR: Putative uncharacterized protein.
  
 
 0.582
Chro_0127
PFAM: Protein of unknown function (DUF3352); KEGG: npu:Npun_F5954 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.538
Chro_2908
PFAM: Protein of unknown function (DUF3352); KEGG: npu:Npun_R2816 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.538
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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