STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3774DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: cyn:Cyan7425_3786 DNA polymerase beta domain protein region; PFAM: DNA polymerase beta domain protein region; SPTR: Putative uncharacterized protein. (97 aa)    
Predicted Functional Partners:
Chro_3775
PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: cyn:Cyan7425_3785 protein of unknown function DUF86; PFAM: protein of unknown function DUF86; SPTR: Putative uncharacterized protein.
 
  
 0.961
Chro_5408
PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: cyn:Cyan7425_3785 protein of unknown function DUF86; PFAM: protein of unknown function DUF86; SPTR: Putative uncharacterized protein.
 
  
 0.838
Chro_3772
PFAM: Protein of unknown function (DUF2281); KEGG: syp:SYNPCC7002_A1073 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.465
Chro_3773
PFAM: PIN domain; KEGG: rmr:Rmar_1954 PilT protein domain protein; SPTR: PIN domain protein like protein.
       0.465
Chro_3776
PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: mba:Mbar_A3272 type I restriction-modification system specificity subunit; PFAM: restriction modification system DNA specificity domain; SPTR: Type I restriction-modification system specificity subunit.
       0.465
Chro_3771
Site-specific DNA-methyltransferase (adenine-specific); PFAM: N-6 DNA Methylase; HsdM N-terminal domain; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002296:IPR002052:IPR003356; KEGG: npu:Npun_F4898 N-6 DNA methylase; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: N-6 DNA methylase.
       0.422
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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