STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3975Transport-associated protein; PFAM: Putative phospholipid-binding domain; InterPro IPR007055; KEGG: mar:MAE_29250 hypothetical protein; PFAM: transport-associated; SPTR: Putative uncharacterized protein. (157 aa)    
Predicted Functional Partners:
Chro_1487
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: ava:Ava_4678 CsbD-like; PFAM: CsbD family protein; SPTR: CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.626
Chro_4353
KEGG: cyc:PCC7424_5261 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.626
Chro_2965
5'-nucleotidase, exopolyphosphatase, 3'-nucleotidase; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: npu:Npun_R1763 stationary phase survival protein SurE; PFAM: Survival protein SurE; SPTR: Stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE.
 
      0.603
Chro_3976
KEGG: npu:Npun_F3786 signal transduction histidine kinase (STHK), LytS; SPTR: Putative uncharacterized protein.
  
  
 0.570
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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