STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_3990PFAM: Bacterial protein of unknown function (DUF924); COGs: COG3803 conserved hypothetical protein; InterPro IPR010323; KEGG: cyc:PCC7424_5377 protein of unknown function DUF924; PFAM: protein of unknown function DUF924; SPTR: Putative uncharacterized protein. (193 aa)    
Predicted Functional Partners:
Chro_3989
Cyclase/dehydrase; PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR005031; KEGG: ava:Ava_2894 cyclase/dehydrase; PFAM: cyclase/dehydrase; SPTR: All0481 protein.
       0.745
Chro_3105
PFAM: Domain of unknown function (DUF296); COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; InterPro IPR005175; KEGG: cya:CYA_1151 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; PFAM: protein of unknown function DUF296; SPTR: Putative uncharacterized protein.
 
      0.639
Chro_0624
PFAM: Pyridoxamine 5'-phosphate oxidase; InterPro IPR011576; KEGG: ana:all4736 hypothetical protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: All4736 protein.
 
      0.601
Chro_4115
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
     0.474
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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