STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4193PFAM: PRC-barrel domain; InterPro IPR007903; KEGG: ava:Ava_4688 PRC-barrel; PFAM: PRC-barrel domain protein; SPTR: PRC-barrel protein. (335 aa)    
Predicted Functional Partners:
Chro_2964
Protein of unknown function DUF2232, membrane; PFAM: Predicted membrane protein (DUF2232); COGs: COG4241 membrane protein; InterPro IPR018710; KEGG: ava:Ava_3065 hypothetical protein; PFAM: Protein of unknown function DUF2232, membrane; SPTR: Putative uncharacterized protein.
  
     0.774
Chro_0378
PFAM: Protein of unknown function (DUF3318); KEGG: ava:Ava_0742 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
Chro_0510
PFAM: Protein of unknown function (DUF3531); KEGG: npu:Npun_F5484 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
Chro_1283
PFAM: Domain of unknown function (DUF477); COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: npu:Npun_R1240 hypothetical protein; PFAM: protein of unknown function DUF477; SPTR: Putative uncharacterized protein.
  
     0.769
Chro_1780
Ribosomal protein PSRP-3/Ycf65; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
  
     0.769
Chro_0259
KEGG: naz:Aazo_0686 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
Chro_1462
Heat shock protein DnaJ domain protein; PFAM: Protein of unknown function (DUF3353); InterPro IPR001623; KEGG: ana:all3259 hypothetical protein; PFAM: heat shock protein DnaJ domain protein; SPTR: All3259 protein.
  
     0.763
ndhL
NAD(P)H-quinone oxidoreductase subunit L; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.758
Chro_4411
PFAM: Protein of unknown function (DUF2930); KEGG: ana:all3821 hypothetical protein; SPTR: All3821 protein.
  
     0.752
Chro_3542
PFAM: Protein of unknown function (DUF3177); KEGG: npu:Npun_R0714 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.751
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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