Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Chro_4282SCP-like extracellular; PFAM: Cysteine-rich secretory protein family; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: ava:Ava_2043 allergen V5/TPX-1 related; PFAM: SCP-like extracellular; SPTR: Allergen V5/Tpx-1 related. (194 aa)    
Predicted Functional Partners:
Chro_4281
PFAM: SNARE associated Golgi protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: cyn:Cyan7425_2737 SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein; SPTR: DedA family protein.
       0.455
Chro_4283
KEGG: ddi:DDB_G0286551 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.445
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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