Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4331PFAM: YCII-related domain; InterPro IPR018524:IPR005545; KEGG: cyc:PCC7424_0886 hypothetical protein; PFAM: YCII-related; SPTR: Putative uncharacterized protein. (88 aa)    
Predicted Functional Partners:
Chro_5144
PFAM: Protein of unknown function (DUF3493); KEGG: ava:Ava_3179 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.692
Chro_4783
KEGG: ana:alr4310 hypothetical protein; SPTR: Alr4310 protein.
  
     0.671
Chro_3566
KEGG: npu:Npun_R3549 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.651
Chro_4330
COGs: COG3937 conserved hypothetical protein; KEGG: ava:Ava_4418 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.643
Chro_5318
KEGG: ana:all3999 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.625
Chro_1693
PFAM: Protein of unknown function (DUF3539); KEGG: ava:Ava_2898 hypothetical protein; SPTR: Asr0485 protein.
  
     0.603
Chro_4332
Phosphoesterase HXTX; PFAM: 2',5' RNA ligase family; COGs: COG1514 2'-5' RNA ligase; InterPro IPR014051; KEGG: ana:alr1166 hypothetical protein; PFAM: Phosphoesterase HXTX; SPTR: Alr1166 protein.
       0.598
Chro_2886
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: NB-ARC domain; InterPro IPR001440:IPR019734:IPR013026; KEGG: npu:Npun_F2261 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein.
  
     0.597
Chro_4394
KEGG: npu:Npun_F0815 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.595
Chro_5544
Protein of unknown function DUF218; PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: ana:all0244 hypothetical protein; PFAM: protein of unknown function DUF218; SPTR: All0244 protein.
  
     0.572
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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