STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4339PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: npu:Npun_R3473 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2. (218 aa)    
Predicted Functional Partners:
Chro_4340
Protein of unknown function DUF2064; PFAM: Uncharacterized protein conserved in bacteria (DUF2064); COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: ava:Ava_0272 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: Putative uncharacterized protein.
     0.990
Chro_2113
PFAM: Radical SAM superfamily; Protein of unknown function (DUF3641); TIGRFAM: radical SAM/Cys-rich domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: npu:Npun_R1900 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Putative uncharacterized protein.
 
     0.773
Chro_5379
PFAM: SNARE associated Golgi protein; COGs: COG0398 conserved hypothetical protein; InterPro IPR015414; KEGG: ana:alr2207 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: Putative uncharacterized protein.
 
   
 0.740
Chro_3323
PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR012999:IPR013027:IPR004099:IPR000815; KEGG: cyh:Cyan8802_0963 pyridine nucleotide-disulphide oxidoreductase dimerisation region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Pyridine nucleotide-disulphide oxidoreductase dimerisation region.
  
     0.599
Chro_4052
PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR001327:IPR004099; KEGG: npu:Npun_F5012 pyridine nucleotide-disulphide oxidoreductase dimerisation region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Pyridine nucleotide-disulphide oxidoreductase dimerisation region.
  
     0.548
Chro_3847
PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: cyn:Cyan7425_0365 fatty acid hydroxylase; PFAM: fatty acid hydroxylase; SPTR: Fatty acid hydroxylase.
  
 
   0.471
Chro_5029
PFAM: Protein of unknown function (DUF1499); COGs: COG4446 conserved hypothetical protein; InterPro IPR010865; KEGG: ana:all1003 hypothetical protein; SPTR: All1003 protein.
  
     0.440
Chro_4031
PFAM: Protein of unknown function (DUF1499); COGs: COG4446 conserved hypothetical protein; InterPro IPR010865; KEGG: ter:Tery_1824 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.432
Chro_2112
Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: ava:Ava_3797 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein.
  
    0.426
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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