STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4434PFAM: Cupin domain; COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: syn:slr8022 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Slr8022 protein. (112 aa)    
Predicted Functional Partners:
Chro_3203
Nitric oxide dioxygenase; PFAM: Globin; COGs: COG1017 Hemoglobin-like flavoprotein; InterPro IPR000971; KEGG: cyt:cce_3794 putative globin-like protein; PFAM: globin; PRIAM: Nitric oxide dioxygenase; SPTR: Putative globin-like protein; Belongs to the globin family.
 
    0.901
Chro_4435
COGs: COG2520 methyltransferase; InterPro IPR013217; KEGG: ava:Ava_4553 methyltransferase; PFAM: Methyltransferase type 12; SPTR: Methyltransferase.
 
     0.859
Chro_1408
KEGG: cyc:PCC7424_4970 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.429
Chro_1407
KEGG: ter:Tery_3474 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.418
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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