STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4496PFAM: FHA domain; COGs: COG2339 membrane protein; InterPro IPR000253; KEGG: npu:Npun_R1522 forkhead-associated protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Forkhead-associated protein. (455 aa)    
Predicted Functional Partners:
Chro_0538
PFAM: Alpha/beta hydrolase of unknown function (DUF1400); InterPro IPR010802; KEGG: syp:SYNPCC7002_A0234 hypothetical protein; PFAM: protein of unknown function DUF1400; SPTR: Putative uncharacterized protein.
  
     0.712
Chro_2438
PFAM: Protein of unknown function (DUF3038); KEGG: npu:Npun_F0108 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.706
Chro_4834
KEGG: ava:Ava_4934 transmembrane transcriptional regulator (anti-sigma factor); SPTR: Alr3281 protein.
  
   
 0.702
Chro_5145
PFAM: Protein of unknown function (DUF1565); S-layer homology domain; TIGRFAM: parallel beta-helix repeat (two copies); InterPro IPR011459:IPR001119:IPR006626; KEGG: ana:alr3608 hypothetical protein; PFAM: protein of unknown function DUF1565; S-layer domain-containing protein; SMART: Parallel beta-helix repeat; SPTR: Putative uncharacterized protein.
  
     0.695
Chro_1145
Hypothetical protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: Verrucomicrobium spinosum paralogous family TIGR02599; prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: ana:all1770 hypothetical protein; SPTR: All1770 protein.
  
     0.675
Chro_0607
PFAM: Protein of unknown function (DUF1361); COGs: COG4330 membrane protein; InterPro IPR009793; KEGG: npu:Npun_F6163 hypothetical protein; PFAM: protein of unknown function DUF1361; SPTR: Putative uncharacterized protein.
  
     0.653
Chro_2634
PFAM: Protein of unknown function (DUF3370); KEGG: ava:Ava_4015 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.647
Chro_1978
Catalytic domain-containing protein of components of various dehydrogenase complexes; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterProIPR003016:IPR000276:IPR000089:IPR004167:IPR 001078; KEGG: npu:Npun_F6414 branched-chain alpha-keto acid dehydrogenase subunit E2; PFAM: catalytic domain-containing protein of components of vari [...]
    
 
 0.634
Chro_4063
PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; COGs: COG2891 Cell shape-determining protein; InterPro IPR007227; KEGG: naz:Aazo_0868 rod shape-determining protein MreD; SPTR: PEP-CTERM putative exosortase interaction domain protein; TIGRFAM: rod shape-determining protein MreD.
  
     0.621
Chro_5569
KEGG: ava:Ava_0863 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.614
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.