Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Chro_4530KEGG: npu:Npun_F4227 hypothetical protein; SPTR: Putative uncharacterized protein. (116 aa)    
Predicted Functional Partners:
Chro_5222
KEGG: npu:Npun_R1875 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.759
Chro_4969
PFAM: Protein of unknown function (DUF3153); KEGG: npu:Npun_R6286 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.725
Chro_0206
PFAM: Protein of unknown function (DUF2993); KEGG: ava:Ava_1819 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.702
Chro_4330
COGs: COG3937 conserved hypothetical protein; KEGG: ava:Ava_4418 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.694
Chro_0894
KEGG: npu:Npun_R4478 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.675
Chro_2039
PFAM: Bacterial pre-peptidase C-terminal domain; InterPro IPR007280; KEGG: npu:Npun_F0272 peptidase domain-containing protein; PFAM: peptidase domain protein; SPTR: Peptidase domain protein.
  
     0.673
Chro_0560
PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR019587; KEGG: naz:Aazo_1945 polyketide cyclase/dehydrase; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein.
  
     0.669
Chro_4529
PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR000836:IPR005765; KEGG: ana:all2063 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; Belongs to the UPRTase family.
       0.656
Chro_1078
COGs: COG1555 DNA uptake protein and related DNA-binding protein; KEGG: ava:Ava_0930 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.648
Chro_2094
PFAM: Protein of unknown function (DUF2949); KEGG: ava:Ava_1924 hypothetical protein; SPTR: Asl4748 protein.
  
     0.639
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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