STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4575PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR017870:IPR000361:IPR016092; KEGG: ava:Ava_4257 HesB/YadR/YfhF; PFAM: HesB/YadR/YfhF-family protein; SPTR: Protein hesB, vegetative; TIGRFAM: iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. (123 aa)    
Predicted Functional Partners:
Chro_4586
Modular FeS cluster scaffolding protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 
 0.955
nifW
Nitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.758
Chro_4576
UBA/THIF-type NAD/FAD binding protein; PFAM: MoeZ/MoeB domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: cyn:Cyan7425_4802 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; SPTR: UBA/THIF-type NAD/FAD binding protein.
 
   
 0.750
Chro_5397
Glutaredoxin-like protein; PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family; COGs: COG0278 Glutaredoxin-related protein; InterPro IPR002109:IPR004480:IPR014434; KEGG: npu:Npun_R3909 glutaredoxin; PFAM: glutaredoxin; SPTR: Glutaredoxin; TIGRFAM: glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.709
Chro_4579
Nitrogen fixation protein; PFAM: Protein of unknown function, DUF269; TIGRFAM: probable nitrogen fixation protein; InterPro IPR004952; KEGG: ava:Ava_4253 hypothetical protein; PFAM: protein of unknown function DUF269; SPTR: Putative uncharacterized protein; TIGRFAM: nitrogen fixation protein.
 
  
 0.693
Chro_1293
PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871:IPR011341; KEGG: cyn:Cyan7425_4473 SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; SPTR: SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS assembly protein, NifU family.
  
  
 0.675
Chro_4574
Ferredoxin (2Fe-2S); PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin [2Fe-2S]; COGs: COG0633 Ferredoxin; InterPro IPR001041:IPR006058:IPR010241; KEGG: ava:Ava_4258 ferredoxin (2Fe-2S); PFAM: ferredoxin; SPTR: Ferredoxin, vegetative; TIGRFAM: ferredoxin [2Fe-2S].
  
 
 0.668
Chro_4578
PFAM: Protein of unknown function (DUF683); COGs: COG5420 Uncharacterized conserved small protein containing a coiled-coil domain; InterPro IPR007774; KEGG: ana:asl1434 hypothetical protein; PFAM: protein of unknown function DUF683; SPTR: UPF0437 protein asl1434.
 
    0.647
Chro_4580
Nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX; InterPro IPR003731:IPR013480; KEGG: ava:Ava_4252 dinitrogenase iron-molybdenum cofactor biosynthesis; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis; TIGRFAM: nitrogen fixation protein NifX.
 
  
 0.643
Chro_0304
PFAM: Tellurite resistance protein TerB; KEGG: ana:alr0821 hypothetical protein; SPTR: Alr0821 protein.
  
 
 0.632
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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