STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4628TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: cyn:Cyan7425_1325 methyltransferase FkbM family; SPTR: Methyltransferase FkbM family; TIGRFAM: methyltransferase FkbM family. (254 aa)    
Predicted Functional Partners:
Chro_4629
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyc:PCC7424_0564 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein.
       0.773
Chro_2222
PFAM: Phosphoglycerate mutase family; InterPro IPR013078; KEGG: ddr:Deide_3p00300 putative phosphoglycerate mutase family, precursor; PFAM: Phosphoglycerate mutase; SPTR: Putative uncharacterized protein.
  
     0.529
Chro_0793
TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: cyn:Cyan7425_4953 methyltransferase FkbM family; SPTR: Methyltransferase FkbM family; TIGRFAM: methyltransferase FkbM family.
  
     0.518
Chro_4627
PFAM: ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525; KEGG: cyt:cce_2090 putative ABC transporter permease protein; PFAM: ABC-2 type transporter; SPTR: Putative ABC transporter permease protein.
 
     0.473
Chro_4624
Methyltransferase FkbM family; PFAM: Met-10+ like-protein; TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: dol:Dole_2361 FkbM family methyltransferase; SPTR: Lipopolysaccharide biosynthesis protein (SAM-dependent methyltransferase protein); TIGRFAM: methyltransferase FkbM family.
 
     0.434
acsF
Mg-protoporphyrin IX monomethyl ester (oxidative) cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.
  
    0.414
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.