STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4691KEGG: acd:AOLE_11755 hypothetical protein; SPTR: Putative uncharacterized protein. (75 aa)    
Predicted Functional Partners:
Chro_4690
KEGG: ehi:EHI_179880 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.554
Chro_4692
PFAM: Acylphosphatase; COGs: COG1254 Acylphosphatase; InterPro IPR001792:IPR017968; KEGG: ana:alr0877 acylphosphatase; PFAM: acylphosphatase; SPTR: Acylphosphatase.
       0.439
Chro_4689
PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: pfo:Pfl01_3356 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Putative ABC transport system, membrane protein.
       0.409
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.