STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4770PFAM: Ribbon-helix-helix protein, copG family; KEGG: mar:MAE_59610 CopG/DNA-binding domain-containing protein; SPTR: CopG domain protein DNA-binding domain protein. (85 aa)    
Predicted Functional Partners:
Chro_4306
PFAM: Protein of unknown function (DUF497); COGs: COG2929 conserved hypothetical protein; InterPro IPR007460; KEGG: npu:Npun_F0976 hypothetical protein; PFAM: protein of unknown function DUF497; SPTR: Putative uncharacterized protein.
 
   0.916
Chro_4769
PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: cyn:Cyan7425_2000 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Alcohol dehydrogenase zinc-binding domain protein.
       0.628
Chro_3939
PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: ava:Ava_A0004 von Willebrand factor, type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Von Willebrand factor, type A.
  
     0.621
Chro_2380
PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: mar:MAE_41540 hypothetical protein; PFAM: polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein.
  
     0.581
Chro_5080
KEGG: amr:AM1_1926 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.488
Chro_1104
KEGG: mar:MAE_46380 hypothetical protein; SPTR: Genome sequencing data, contig C327.
  
     0.485
ftsH-4
Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.466
Chro_4768
PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); COGs: COG2942 N-acyl-D-glucosamine 2-epimerase; InterPro IPR010819; KEGG: npu:Npun_R2950 N-acylglucosamine 2-epimerase; PFAM: N-acylglucosamine 2-epimerase; PRIAM: N-acylglucosamine 2-epimerase; SPTR: N-acylglucosamine 2-epimerase.
       0.459
psbX
Photosystem II protein PsbX; Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.
  
     0.417
Chro_0859
PilT protein domain protein; PFAM: PIN domain; InterPro IPR002716; KEGG: mar:MAE_62610 hypothetical protein; PFAM: PilT protein domain protein; SPTR: Virulence-associated protein VapC homolog.
  
     0.414
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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