STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4797PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ana:alr5223 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein. (455 aa)    
Predicted Functional Partners:
Chro_4796
Capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR003856:IPR005702; KEGG: mar:MAE_32940 protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Capsular exopolysaccharide family protein; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.772
Chro_4800
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: naz:Aazo_4921 group 1 glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1.
  
     0.603
Chro_3739
PFAM: Protein of unknown function (DUF1822); InterPro IPR014951; KEGG: npu:Npun_F1636 hypothetical protein; PFAM: protein of unknown function DUF1822; SPTR: Putative uncharacterized protein.
  
     0.587
Chro_4802
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ana:alr5237 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein.
  
     0.576
Chro_4801
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ana:alr5238 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein.
  
     0.567
Chro_1837
PFAM: Domain of Unknown Function (DUF928); InterPro IPR010328; KEGG: ana:all7309 hypothetical protein; PFAM: protein of unknown function DUF928; SPTR: All7309 protein.
  
    0.500
Chro_1839
PFAM: Protein of unknown function (DUF1822); InterPro IPR014951; KEGG: npu:Npun_F1636 hypothetical protein; PFAM: protein of unknown function DUF1822; SPTR: Putative uncharacterized protein.
  
     0.489
Chro_4803
KEGG: ana:alr5236 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.475
Chro_4798
Putative colanic acid biosynthesis acetyltransferase WcaF; PFAM: Bacterial transferase hexapeptide (three repeats); COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: cyn:Cyan7425_4965 putative colanic acid biosynthesis acetyltransferase WcaF; SPTR: Acetyltransferase (Isoleucine patch superfamily).
 
  
 0.465
Chro_3741
PFAM: Domain of Unknown Function (DUF928); InterPro IPR010328; KEGG: ana:all3179 hypothetical protein; PFAM: protein of unknown function DUF928; SPTR: All3179 protein.
  
    0.426
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.