STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4948PFAM: Cupin domain; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: ava:Ava_1579 TonB box-like; PFAM: Cupin 2 conserved barrel domain protein; SPTR: TonB box-like protein. (151 aa)    
Predicted Functional Partners:
Chro_4949
Hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR013736:IPR005674; KEGG: ava:Ava_4266 peptidase S15; PFAM: X-Pro dipeptidyl-peptidase domain protein; SPTR: Peptidase S15; TIGRFAM: hydrolase CocE/NonD family protein.
 
     0.845
Chro_4947
PFAM: Isochorismatase family; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: npu:Npun_F2433 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: Isochorismatase hydrolase.
 
     0.808
Chro_0544
Hypothetical protein; PFAM: Ureidoglycolate hydrolase; KEGG: ava:Ava_0888 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
Chro_1233
KEGG: ava:Ava_0475 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.711
Chro_3192
PFAM: Protein of unknown function (DUF3172); KEGG: npu:Npun_F4394 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.684
Chro_0409
KEGG: npu:Npun_F3847 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.679
Chro_0894
KEGG: npu:Npun_R4478 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.654
Chro_4972
PFAM: Ycf66 protein N-terminus; InterPro IPR010004; KEGG: npu:Npun_R5948 Ycf66 family protein; PFAM: Ycf66 family protein; SPTR: Ycf66 family protein.
  
     0.644
Chro_4021
KEGG: npu:Npun_F3715 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.622
Chro_2425
TspO and MBR related proteins; PFAM: TspO/MBR family; COGs: COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog); InterPro IPR004307; KEGG: npu:Npun_F0486 TspO and MBR like protein; PFAM: TspO/MBR family protein; SPTR: TspO and MBR like protein.
  
     0.613
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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