STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4977Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: npu:Npun_R5943 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein. (266 aa)    
Predicted Functional Partners:
Chro_4976
TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; InterPro IPR006339; KEGG: ava:Ava_0524 AbrB family transcriptional regulator; SPTR: Alr0946 protein; TIGRFAM: transcriptional regulator, AbrB family.
 
   
 0.687
Chro_4137
KEGG: npu:Npun_R0282 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.682
Chro_0305
KEGG: ava:Ava_4430 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.664
Chro_0067
KEGG: npu:Npun_R1551 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.660
Chro_0051
KEGG: npu:Npun_F0167 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.639
Chro_0026
PFAM: Protein of unknown function (DUF3769); KEGG: ava:Ava_3002 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.632
Chro_3339
KEGG: npu:Npun_R5796 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.625
Chro_5460
Orange carotenoid-binding protein; PFAM: Nuclear transport factor 2 (NTF2) domain; Orange carotenoid protein, N-terminal; InterPro IPR015233:IPR002075; KEGG: naz:Aazo_2542 orange carotenoid protein; PFAM: Orange carotenoid-binding protein; nuclear transport factor 2; SPTR: Putative uncharacterized protein.
  
     0.610
Chro_2740
KEGG: ava:Ava_0962 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.604
Chro_1527
Hypothetical protein; PFAM: Domain of unknown function (DUF3598); KEGG: ana:all1756 hypothetical protein; SPTR: All1756 protein.
  
     0.603
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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