STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_4998PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: ana:all1046 ATP-binding protein of ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ATP-binding protein of ABC transporter. (261 aa)    
Predicted Functional Partners:
Chro_4999
Neutral amino acid ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: ava:Ava_3705 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator.
 
 0.997
Chro_0655
Neutral amino acid ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: npu:Npun_F3826 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator.
 
 0.991
Chro_3518
Urea ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR017778:IPR001851; KEGG: ana:all1949 permease protein of ABC transporter; PFAM: inner-membrane translocator; SPTR: Permease protein of ABC transporter; TIGRFAM: urea ABC transporter, permease protein UrtC.
  
 0.991
Chro_2525
Neutral amino acid-binding protein; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000337:IPR001828; KEGG: ana:alr1834 hypothetical protein; PFAM: Extracellular ligand-binding receptor; SPTR: Alr1834 protein.
 
 
 0.984
Chro_4482
PFAM: ABC transporter; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: ana:all2912 ATP-binding protein of branched-chain amino acid ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ATP-binding protein of branched-chain amino acid ABC transporter.
 
 
0.962
Chro_3517
Urea ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR017779:IPR001851; KEGG: cyn:Cyan7425_2259 UreA ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; SPTR: Urea ABC transporter, permease protein UrtB; TIGRFAM: urea ABC transporter, permease protein UrtB.
  
 0.922
Chro_3520
PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017780:IPR003439:IPR003593; KEGG: cyn:Cyan7425_2256 UreA ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein, putative; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE.
 
  
0.826
Chro_5437
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: npu:Npun_F6191 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Putative uncharacterized protein.
 
  
 0.822
Chro_1366
Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: cyc:PCC7424_0941 serine/threonine protein kinase; PFAM: Extracellular ligand-binding receptor; SPTR: Serine/threonine protein kinase.
 
  
 0.767
Chro_5435
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: cyc:PCC7424_1306 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor.
 
  
 0.750
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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