STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_5003PFAM: Uncharacterized conserved protein (DUF2246); KEGG: amr:AM1_5121 hypothetical protein; SPTR: Putative uncharacterized protein. (182 aa)    
Predicted Functional Partners:
Chro_2226
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.854
Chro_5001
InterPro IPR013096; KEGG: ava:Ava_0670 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Putative uncharacterized protein.
       0.768
Chro_5002
Alpha/beta hydrolase fold protein; InterPro IPR000073; KEGG: amr:AM1_1387 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: Putative uncharacterized protein.
       0.768
Chro_0578
Chorismate lyase; PFAM: Protein of unknown function (DUF98); KEGG: ava:Ava_0515 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.643
Chro_5004
TspO and MBR related proteins; PFAM: TspO/MBR family; KEGG: npu:Npun_R1391 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.610
Chro_5370
PFAM: ATP adenylyltransferase; COGs: COG4360 ATP adenylyltransferase (5' 5'''-P-1 P-4-tetraphosphate phosphorylase II); InterPro IPR019200; KEGG: npu:Npun_F0728 Ap4A phosphorylase II; PFAM: ATP adenylyltransferase-like; SPTR: Ap4A phosphorylase II.
  
     0.528
Chro_2073
KEGG: npu:Npun_R0705 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.525
Chro_0374
PFAM: Tryptophan-rich protein (DUF2389); TIGRFAM: tryptophan-rich conserved hypothetical protein; InterPro IPR012663; KEGG: npu:Npun_R4423 hypothetical protein; PFAM: Conserved hypothetical protein CHP02450, tryptophan-rich; SPTR: Putative uncharacterized protein.
  
     0.523
Chro_0645
PFAM: Sigma-54 interaction domain; Cyclic nucleotide-binding domain; COGs: COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; InterPro IPR000595:IPR002078:IPR017896:IPR017900; KEGG: ava:Ava_3536 cyclic nucleotide-binding domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain (CNMP-BD) protein.
 
     0.496
Chro_0134
KEGG: npu:Npun_F0888 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.471
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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