STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_5087KEGG: ana:all3173 hypothetical protein; SPTR: All3173 protein. (141 aa)    
Predicted Functional Partners:
Chro_4329
KEGG: ava:Ava_4417 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.760
Chro_1761
PFAM: Protein of unknown function (DUF2605); InterPro IPR019728; KEGG: ava:Ava_2786 hypothetical protein; PFAM: Protein of unknown function DUF2605; SPTR: Putative uncharacterized protein.
  
     0.757
Chro_0511
KEGG: npu:Npun_F5483 TPR repeat-containing protein; SPTR: TPR repeat-containing protein.
  
     0.755
Chro_5584
Beta-lactamase domain-containing protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR001307; KEGG: npu:Npun_R1387 beta-lactamase domain-containing protein; SPTR: PsoR.
  
     0.746
Chro_4128
PFAM: Protein of unknown function (DUF2854); KEGG: cyc:PCC7424_3063 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.745
Chro_4532
KEGG: ava:Ava_3108 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.745
Chro_0209
KEGG: ter:Tery_4424 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
Chro_4888
KEGG: ter:Tery_1512 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
Chro_4705
KEGG: ava:Ava_1978 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.741
Chro_3409
PFAM: CpcD/allophycocyanin linker domain; InterPro IPR008213; KEGG: tel:tsr1960 phycocyanin-associated 7.8kDa rod linker protein; PFAM: CpcD phycobilisome linker domain protein; SPTR: Phycocyanin-associated 7.8kDa rod linker protein.
  
     0.739
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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